A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16724



Internal ID15833986
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32555588..32556334hg38UCSC Ensembl
Outerchr6:32555156..32556855hg38UCSC Ensembl
Innerchr6:32523365..32524111hg19UCSC Ensembl
Outerchr6:32522933..32524632hg19UCSC Ensembl
Innerchr6:32631343..32632089hg18UCSC Ensembl
Outerchr6:32630911..32632610hg18UCSC Ensembl
Innerchr6:32631343..32632089hg17UCSC Ensembl
Outerchr6:32630911..32632610hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg381700
hg191700
hg181700
hg171700
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7883
Supporting Variants
SamplesNA18517
Known GenesHLA-DRB6
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv16724
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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