A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1672287



Internal ID15183109
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:82420178..82538962hg38UCSC Ensembl
Innerchr15:83088908..83207713hg19UCSC Ensembl
Innerchr15:80885963..81004768hg18UCSC Ensembl
Innerchr15:80814727..80933532hg16UCSC Ensembl
Cytoband15q25.2
Allele length
AssemblyAllele length
hg38118785
hg19118806
hg18118806
hg16118806
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469699
Supporting Variants
Samples
Known GenesCSPG4P8, GOLGA6L20, GOLGA6L9, LOC727751, LOC80154, RPS17, RPS17L
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1672287
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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