A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16642



Internal ID15492124
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:7887756..8418897hg38UCSC Ensembl
Outerchr9:7827373..8511613hg38UCSC Ensembl
Innerchr9:7887756..8418897hg19UCSC Ensembl
Outerchr9:7827373..8511613hg19UCSC Ensembl
Innerchr9:7877756..8408897hg18UCSC Ensembl
Outerchr9:7817373..8501613hg18UCSC Ensembl
Innerchr9:7877756..8408897hg17UCSC Ensembl
Outerchr9:7817373..8501613hg17UCSC Ensembl
Cytoband9p24.1
Allele length
AssemblyAllele length
hg38684241
hg19684241
hg18684241
hg17684241
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8414
Supporting Variants
SamplesNA18942
Known GenesPTPRD
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv16642
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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