A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16461



Internal ID15838228
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:34648088..34654423hg38UCSC Ensembl
Outerchr6:34647304..34654919hg38UCSC Ensembl
Innerchr6:34615865..34622200hg19UCSC Ensembl
Outerchr6:34615081..34622696hg19UCSC Ensembl
Innerchr6:34723843..34730178hg18UCSC Ensembl
Outerchr6:34723059..34730674hg18UCSC Ensembl
Innerchr6:34723843..34730178hg17UCSC Ensembl
Outerchr6:34723059..34730674hg17UCSC Ensembl
Cytoband6p21.31
Allele length
AssemblyAllele length
hg387616
hg197616
hg187616
hg177616
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7888
Supporting Variants
SamplesNA18860
Known GenesC6orf106
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv16461
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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