A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16302



Internal ID15832740
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:115210159..115245616hg38UCSC Ensembl
Outerchr6:115209447..115260457hg38UCSC Ensembl
Innerchr6:115531323..115566780hg19UCSC Ensembl
Outerchr6:115530611..115581621hg19UCSC Ensembl
Innerchr6:115638016..115673473hg18UCSC Ensembl
Outerchr6:115637304..115688314hg18UCSC Ensembl
Innerchr6:115638016..115673473hg17UCSC Ensembl
Outerchr6:115637304..115688314hg17UCSC Ensembl
Cytoband6q22.1
Allele length
AssemblyAllele length
hg3851011
hg1951011
hg1851011
hg1751011
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7962
Supporting Variants
SamplesNA18502
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv16302
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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