A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16262716



Internal ID20471934
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:170833685..178756119hg38UCSC Ensembl
chr5:170260689..178183120hg19UCSC Ensembl
Cytoband5q35.1
Allele length
AssemblyAllele length
hg387922435
hg197922432
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4763538
Supporting Variants
Samples
Known GenesARL10, ATP6V0E1, B4GALT7, BNIP1, BOD1, C5orf47, CDHR2, CLK4, CLTB, COL23A1, CPEB4, CPLX2, CREBRF, DBN1, DDX41, DOK3, DRD1, DUSP1, EFCAB9, EIF4E1B, ERGIC1, F12, FAF2, FAM153A, FAM153B, FAM153C, FAM193B, FBXW11, FGF18, FGFR4, FLJ16171, GMCL1P1, GPRIN1, GRK6, HIGD2A, HK3, HMP19, HNRNPAB, HRH2, KIAA1191, LMAN2, LOC100268168, LOC100507387, LOC100996385, LOC101928136, LOC101928154, LOC102577424, LOC202181, LOC285593, LOC643201, LOC728554, MIR3912, MIR4281, MIR4634, MIR8056, MSX2, MXD3, N4BP3, NEURL1B, NHP2, NKX2-5, NOP16, NPM1, NSD1, PDLIM7, PFN3, PHYKPL, PRELID1, PROP1, PRR7, PRR7-AS1, RAB24, RANBP17, RGS14, RMND5B, RNF44, RPL26L1, SFXN1, SH3PXD2B, SIMC1, SLC34A1, SNCB, SNORA74B, STC2, STK10, THOC3, TLX3, TMED9, TSPAN17, UBTD2, UIMC1, UNC5A, ZNF346, ZNF354A
MethodSequencing
Analysis
Platform
Comments
ReferenceQuan_et_al_2021
Pubmed ID34034800
Accession Number(s)nssv16262716
Frequency
Sample Size25
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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