A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16091370



Internal ID20163314
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:124425511..124546688hg38UCSC Ensembl
chr5:123761204..123882381hg19UCSC Ensembl
Cytoband5q23.2
Allele length
AssemblyAllele length
hg38121178
hg19121178
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4320262
Supporting Variants
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16091370
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.02062


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