A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16091283



Internal ID19816541
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr21:24797411..25226815hg38UCSC Ensembl
chr21:26169725..26599129hg19UCSC Ensembl
Cytoband21q21.2
Allele length
AssemblyAllele length
hg38429405
hg19429405
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4331878
Supporting Variants
Samples
Known GenesLOC339622
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16091283
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.000046


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