A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16091234



Internal ID20163178
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:85606226..85607028hg38UCSC Ensembl
chr10:87365983..87366785hg19UCSC Ensembl
Cytoband10q23.1
Allele length
AssemblyAllele length
hg38803
hg19803
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4315055
Supporting Variants
Samples
Known GenesGRID1, GRID1-AS1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16091234
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.000046


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