A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16091218



Internal ID20163162
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:40233406..40235439hg38UCSC Ensembl
chr4:40235026..40237059hg19UCSC Ensembl
Cytoband4p14
Allele length
AssemblyAllele length
hg382034
hg192034
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4325384
Supporting Variants
Samples
Known GenesRHOH
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16091218
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.177689


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