A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16090373



Internal ID19815643
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:49259554..49487599hg38UCSC Ensembl
chr6:49227201..49455312hg19UCSC Ensembl
Cytoband6p12.3
Allele length
AssemblyAllele length
hg38228046
hg19228112
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4325952
Supporting Variants
Samples
Known GenesCENPQ, MUT
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16090373
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.000046


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer