A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16090151



Internal ID19815421
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:110649252..110686967hg38UCSC Ensembl
chr1:111191874..111229589hg19UCSC Ensembl
Cytoband1p13.3
Allele length
AssemblyAllele length
hg3837716
hg1937716
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4328591
Supporting Variants
Samples
Known GenesKCNA3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16090151
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.000046


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