A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16088



Internal ID15483715
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:103612647..103617734hg38UCSC Ensembl
Outerchr1:103610702..103618944hg38UCSC Ensembl
Innerchr1:104155269..104160356hg19UCSC Ensembl
Outerchr1:104153324..104161566hg19UCSC Ensembl
Innerchr1:103956792..103961879hg18UCSC Ensembl
Outerchr1:103954847..103963089hg18UCSC Ensembl
Innerchr1:103867290..103872377hg17UCSC Ensembl
Outerchr1:103865345..103873587hg17UCSC Ensembl
Cytoband1p21.1
Allele length
AssemblyAllele length
hg388243
hg198243
hg188243
hg178243
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10428
Supporting Variants
SamplesNA12155
Known GenesAMY2A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv16088
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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