A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16086769



Internal ID20158725
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:127455636..127455637hg38UCSC Ensembl
chr9:130217915..130217916hg19UCSC Ensembl
Cytoband9q33.3
Allele length
AssemblyAllele length
hg38198
hg19198
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4496309
Supporting Variants
Samples
Known GenesLRSAM1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16086769
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.002813


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