A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16084841



Internal ID19810111
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:72523083..72523084hg38UCSC Ensembl
chr9:75137999..75138000hg19UCSC Ensembl
Cytoband9q21.13
Allele length
AssemblyAllele length
hg384224
hg194224
Variant TypeCNV line1 insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4562891
Supporting Variants
Samples
Known GenesTMC1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16084841
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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