A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16082999



Internal ID20154955
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:122885450..122885451hg38UCSC Ensembl
chr8:123897689..123897690hg19UCSC Ensembl
Cytoband8q24.13
Allele length
AssemblyAllele length
hg3874
hg1974
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4491288
Supporting Variants
Samples
Known GenesZHX2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16082999
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.002076


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