A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16079875



Internal ID20151831
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:38335544..38335545hg38UCSC Ensembl
chr8:38193062..38193063hg19UCSC Ensembl
Cytoband8p11.23
Allele length
AssemblyAllele length
hg381627
hg191627
Variant TypeCNV line1 insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4571684
Supporting Variants
Samples
Known GenesWHSC1L1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16079875
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.002076


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