A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16066722



Internal ID19791976
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:41783429..41783430hg38UCSC Ensembl
chr6:41751167..41751168hg19UCSC Ensembl
Cytoband6p21.1
Allele length
AssemblyAllele length
hg38803
hg19803
Variant TypeCNV sva insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4572200
Supporting Variants
Samples
Known GenesPRICKLE4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16066722
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer