A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16065574



Internal ID19790828
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:157139720..157139721hg38UCSC Ensembl
chr5:156566731..156566732hg19UCSC Ensembl
Cytoband5q33.3
Allele length
AssemblyAllele length
hg38326
hg19326
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4549091
Supporting Variants
Samples
Known GenesMED7
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16065574
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.121325


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