A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16057402



Internal ID20129358
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:145652830..145652831hg38UCSC Ensembl
chr4:146573982..146573983hg19UCSC Ensembl
Cytoband4q31.21
Allele length
AssemblyAllele length
hg38805
hg19805
Variant TypeCNV sva insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4564069
Supporting Variants
Samples
Known GenesMMAA
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16057402
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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