A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16055502



Internal ID19780756
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:87807395..87807396hg38UCSC Ensembl
chr4:88728547..88728548hg19UCSC Ensembl
Cytoband4q22.1
Allele length
AssemblyAllele length
hg38319
hg19319
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4547793
Supporting Variants
Samples
Known GenesIBSP
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16055502
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.026732


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