A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16048837



Internal ID19774091
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:120699116..120699117hg38UCSC Ensembl
chr3:120417963..120417964hg19UCSC Ensembl
Cytoband3q13.33
Allele length
AssemblyAllele length
hg38418
hg19418
Variant TypeCNV line1 insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4563914
Supporting Variants
Samples
Known GenesRABL3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16048837
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.001475


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer