A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16045302



Internal ID20117258
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:8224489..8224490hg38UCSC Ensembl
chr2:8364619..8364620hg19UCSC Ensembl
Cytoband2p25.1
Allele length
AssemblyAllele length
hg38740
hg19740
Variant TypeCNV line1 insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4571435
Supporting Variants
Samples
Known GenesLINC00299
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16045302
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.00023


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