A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16040981



Internal ID20112937
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:171748963..171748964hg38UCSC Ensembl
chr2:172605473..172605474hg19UCSC Ensembl
Cytoband2q31.1
Allele length
AssemblyAllele length
hg38356
hg19356
Variant TypeCNV sva insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4571857
Supporting Variants
Samples
Known GenesDYNC1I2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16040981
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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