A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16022861



Internal ID20094817
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:45637522..45637523hg38UCSC Ensembl
chr1:46103194..46103195hg19UCSC Ensembl
Cytoband1p34.1
Allele length
AssemblyAllele length
hg3858
hg1958
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4537003
Supporting Variants
Samples
Known GenesGPBP1L1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16022861
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.26579


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