A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16018295



Internal ID20090251
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:26272465..26272466hg38UCSC Ensembl
chr18:23852429..23852430hg19UCSC Ensembl
Cytoband18q11.2
Allele length
AssemblyAllele length
hg381221
hg191221
Variant TypeCNV sva insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4574427
Supporting Variants
Samples
Known GenesTAF4B
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16018295
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000415


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