A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16017685



Internal ID20089641
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:15306667..15306668hg38UCSC Ensembl
chr17:15209984..15209985hg19UCSC Ensembl
Cytoband17p12
Allele length
AssemblyAllele length
hg38254
hg19254
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4547897
Supporting Variants
Samples
Known GenesTEKT3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16017685
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.001199


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer