A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16011615



Internal ID20083571
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:35564352..35564353hg38UCSC Ensembl
chr15:35856553..35856554hg19UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg38236
hg19236
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4512219
Supporting Variants
Samples
Known GenesDPH6-AS1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv16011615
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000323


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