A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16011009



Internal ID19736263
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr14:75027668..75027669hg38UCSC Ensembl
chr14:75494371..75494372hg19UCSC Ensembl
Cytoband14q24.3
Allele length
AssemblyAllele length
hg38163
hg19163
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4502814
Supporting Variants
Samples
Known GenesMLH3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16011009
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000234


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