A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16005427



Internal ID19730681
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:46557526..46557527hg38UCSC Ensembl
chr13:47131661..47131662hg19UCSC Ensembl
Cytoband13q14.13
Allele length
AssemblyAllele length
hg38321
hg19321
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4538264
Supporting Variants
Samples
Known GenesLRCH1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16005427
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.287473


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer