A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16005302



Internal ID19730556
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:37012585..37012586hg38UCSC Ensembl
chr13:37586722..37586723hg19UCSC Ensembl
Cytoband13q13.3
Allele length
AssemblyAllele length
hg38281
hg19281
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4510886
Supporting Variants
Samples
Known GenesSUPT20H
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16005302
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000784


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer