A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16004500



Internal ID19729754
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:32446928..32446929hg38UCSC Ensembl
chr13:33021065..33021066hg19UCSC Ensembl
Cytoband13q13.1
Allele length
AssemblyAllele length
hg38321
hg19321
Variant TypeCNV mobile element insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4573287
Supporting Variants
Samples
Known GenesN4BP2L2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16004500
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.004702


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