A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16003084



Internal ID19728338
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:119693044..119693045hg38UCSC Ensembl
chr12:120130849..120130850hg19UCSC Ensembl
Cytoband12q24.23
Allele length
AssemblyAllele length
hg38280
hg19280
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4511972
Supporting Variants
Samples
Known GenesCIT
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv16003084
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.007715


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