A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15989604



Internal ID19714858
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:80638291..80754550hg38UCSC Ensembl
chrX:79893790..80010049hg19UCSC Ensembl
CytobandXq21.1
Allele length
AssemblyAllele length
hg38116260
hg19116260
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4035615
Supporting Variants
Samples
Known GenesBRWD3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15989604
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000238


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