A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15988606



Internal ID19713860
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:97371680..97927363hg38UCSC Ensembl
chrX:96626679..97182361hg19UCSC Ensembl
CytobandXq21.33
Allele length
AssemblyAllele length
hg38555684
hg19555683
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4041771
Supporting Variants
Samples
Known GenesDIAPH2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15988606
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000143


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