A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15987442



Internal ID19712696
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:323348..417405hg38UCSC Ensembl
chrX:284083..378140hg19UCSC Ensembl
CytobandXp22.33
Allele length
AssemblyAllele length
hg3894058
hg1994058
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4033879
Supporting Variants
Samples
Known GenesPPP2R3B
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15987442
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.001109


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