A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15986396



Internal ID19711650
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:83724102..83743343hg38UCSC Ensembl
chr9:86339017..86358258hg19UCSC Ensembl
Cytoband9q21.32
Allele length
AssemblyAllele length
hg3819242
hg1919242
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4187867
Supporting Variants
Samples
Known GenesGKAP1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15986396
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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