A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15984405



Internal ID20056346
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:116297407..116298967hg38UCSC Ensembl
chr8:117309645..117311205hg19UCSC Ensembl
Cytoband8q23.3
Allele length
AssemblyAllele length
hg381561
hg191561
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4162370
Supporting Variants
Samples
Known GenesLINC00536
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15984405
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000092


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