A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15983702



Internal ID20055642
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:90547194..90848683hg38UCSC Ensembl
chr8:91559422..91860911hg19UCSC Ensembl
Cytoband8q21.3
Allele length
AssemblyAllele length
hg38301490
hg19301490
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4165689
Supporting Variants
Samples
Known GenesLINC01030, NECAB1, TMEM64
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15983702
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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