A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15982775



Internal ID20054715
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:43177621..43760443hg38UCSC Ensembl
chr8:43032764..43615586hg19UCSC Ensembl
Cytoband8p11.1
Allele length
AssemblyAllele length
hg38582823
hg19582823
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4153265
Supporting Variants
Samples
Known GenesHGSNAT, POTEA
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15982775
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000461


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