A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15982756



Internal ID19708010
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:19966934..20199917hg38UCSC Ensembl
chr8:19824445..20057428hg19UCSC Ensembl
Cytoband8p21.3
Allele length
AssemblyAllele length
hg38232984
hg19232984
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4168321
Supporting Variants
Samples
Known GenesATP6V1B2, LPL, SLC18A1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15982756
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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