A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15981982



Internal ID19707236
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:137920721..138312401hg38UCSC Ensembl
chr7:137605467..137997146hg19UCSC Ensembl
Cytoband7q33
Allele length
AssemblyAllele length
hg38391681
hg19391680
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4167481
Supporting Variants
Samples
Known GenesAKR1D1, CREB3L2, LOC100130880, MIR4468
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15981982
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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