A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15981705



Internal ID20053645
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:116915593..116967007hg38UCSC Ensembl
chr7:116555647..116607061hg19UCSC Ensembl
Cytoband7q31.2
Allele length
AssemblyAllele length
hg3851415
hg1951415
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4157285
Supporting Variants
Samples
Known GenesCAPZA2, ST7, ST7-AS1, ST7-OT4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15981705
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.00023


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