A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15981594



Internal ID19706848
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:82287876..82886083hg38UCSC Ensembl
chr7:81917192..82515399hg19UCSC Ensembl
Cytoband7q21.11
Allele length
AssemblyAllele length
hg38598208
hg19598208
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4135935
Supporting Variants
Samples
Known GenesCACNA2D1, PCLO
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15981594
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer