A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15980844



Internal ID20052784
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:32169694..32385530hg38UCSC Ensembl
chr7:32209306..32425142hg19UCSC Ensembl
Cytoband7p14.3
Allele length
AssemblyAllele length
hg38215837
hg19215837
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4147816
Supporting Variants
Samples
Known GenesPDE1C
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15980844
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer