A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15980146



Internal ID20052086
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:165462081..165480473hg38UCSC Ensembl
chr6:165875569..165893961hg19UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg3818393
hg1918393
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4151588
Supporting Variants
Samples
Known GenesPDE10A
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15980146
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.00212


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