A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15978000



Internal ID19703254
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:11117321..11117488hg38UCSC Ensembl
chr6:11117554..11117721hg19UCSC Ensembl
Cytoband6p24.2
Allele length
AssemblyAllele length
hg38168
hg19168
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4117931
Supporting Variants
Samples
Known GenesSMIM13
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15978000
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000278


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