A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15976835



Internal ID19702089
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:67193933..67233603hg38UCSC Ensembl
chr5:66489761..66529431hg19UCSC Ensembl
Cytoband5q12.3
Allele length
AssemblyAllele length
hg3839671
hg1939671
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4129826
Supporting Variants
Samples
Known GenesCD180
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15976835
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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