A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15976819



Internal ID20048759
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:65729626..65730845hg38UCSC Ensembl
chr5:65025453..65026672hg19UCSC Ensembl
Cytoband5q12.3
Allele length
AssemblyAllele length
hg381220
hg191220
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4128264
Supporting Variants
Samples
Known GenesNLN
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15976819
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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