A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15974105



Internal ID19699359
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:46946997..46948823hg38UCSC Ensembl
chr4:46949014..46950840hg19UCSC Ensembl
Cytoband4p12
Allele length
AssemblyAllele length
hg381827
hg191827
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4106894
Supporting Variants
Samples
Known GenesGABRA4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15974105
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequency0.000046


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